cmtklib.bids.network module
This module provides functions to handle connectome networks / graphs generated by CMP3.
- cmtklib.bids.network.load_graphs(output_dir, subjects, parcellation_scheme, weight)[source]
Return a dictionary of connectivity matrices (graph adjacency matrices).
Still in development
- Parameters
output_dir (string) – Output/derivatives directory
subjects (list) – List of subject
parcellation_scheme (['NativeFreesurfer', 'Lausanne2018', 'Custom']) – Parcellation scheme
weight (['number_of_fibers','fiber_density',...]) – Edge metric to extract from the graph
- Returns
connmats – Dictionary of connectivity matrices
- Return type