cmp.bidsappmanager.stages.connectome.fmri_connectome module¶
Definition of functional connectome config and stage UI classes.
-
class
cmp.bidsappmanager.stages.connectome.fmri_connectome.
ConnectomeConfigUI
[source]¶ Bases:
cmp.stages.connectome.fmri_connectome.ConnectomeConfig
Class that extends the
ConnectomeConfig
with graphical components.-
output_types
¶ A list of
output_types
. Validoutput_types
are ‘gPickle’, ‘mat’, ‘cff’, ‘graphml’- Type
list of string
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traits_view
¶ TraitsUI view that displays the Attributes of this class
- Type
traits.ui.View
-
-
class
cmp.bidsappmanager.stages.connectome.fmri_connectome.
ConnectomeStageUI
(bids_dir, output_dir)[source]¶ Bases:
cmp.stages.connectome.fmri_connectome.ConnectomeStage
Class that extends the
ConnectomeStage
with graphical components.-
log_visualization
¶ If True, display with a log transformation
- Type
traits.Bool
-
circular_layout
¶ If True, display the connectivity matrix using a circular layout
- Type
traits.Bool
Button that displays the selected connectivity matrix in the graphical component for quality inspection
- Type
traits.ui.Button
-
inspect_outputs_view
¶ TraitsUI view that displays the quality inspection window of this stage
- Type
traits.ui.View
-
config_view
¶ TraitsUI view that displays the configuration window of this stage
- Type
traits.ui.View
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