cmp.cli.connectomemapper3 module

This module defines the connectomemapper3 script that is called by the BIDS App.

cmp.cli.connectomemapper3.create_parser()

Create the parser of connectomemapper3 python script.

Returns

p – Parser

Return type

argparse.ArgumentParser

cmp.cli.connectomemapper3.dep_check()

Check if dependencies are installed.

This includes for the moment:

• FSL

• FreeSurfer

cmp.cli.connectomemapper3.info()

Print version of copyright.

cmp.cli.connectomemapper3.main()

Main function that runs the connectomemapper3 python script.

Returns

exit_code –

An exit code given to sys.exit() that can be:

• ’0’ in case of successful completion

• ’1’ in case of an error

Return type

{0, 1}