cmp.bidsappmanager.stages.parcellation.parcellation module

Definition of parcellation config and stage UI classes.

class cmp.bidsappmanager.stages.parcellation.parcellation.ParcellationConfigUI[source]

Bases: cmp.stages.parcellation.parcellation.ParcellationConfig

Class that extends the ParcellationConfig with graphical components.

custom_parcellation_view

VGroup that displays the different parts of a custom BIDS parcellation file

Type: traits.ui.View

traits_view

TraitsUI view that displays the attributes of this class, e.g. the parameters for the stage

Type: traits.ui.View

class cmp.bidsappmanager.stages.parcellation.parcellation.ParcellationStageUI(pipeline_mode, subject, session, bids_dir, output_dir)[source]

Bases: cmp.stages.parcellation.parcellation.ParcellationStage

Class that extends the ParcellationStage with graphical components.

inspect_output_button

Button that displays the selected output in an appropriate viewer (present only in the window for quality inspection)

Type: traits.ui.Button

inspect_outputs_view

TraitsUI view that displays the quality inspection window of this stage

Type: traits.ui.View

config_view

TraitsUI view that displays the configuration window of this stage

Type: traits.ui.View